The detailed information of tRNA gene sequence


Sequence ID>WENV170651353
Genome IDJRYF01008459
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 6972
End posion on genome 7046
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cttcgaagca
tRNA gene sequence 
CGGAAAGTAGCTCAGTGGGTAGAGCATCTGACTCGGAATCAGACGGTCGAGGGTTCGACT
CCCTCTTTTCCTCCAt
Downstream region at tRNA end position 
ggataaagcc
Secondary structure (Cloverleaf model)
>WENV170651353	Pro	CGG
                   a      CCAt ggataaagcc
                     C   T
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T          T C
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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