The detailed information of tRNA gene sequence


Sequence ID>WENV170651357
Genome IDJRYF01008655
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 7800
End posion on genome 7724
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttcggatacc
tRNA gene sequence 
GGAGCGGTAGTTCAGATGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gtctccaggg
Secondary structure (Cloverleaf model)
>WENV170651357	Asp	GTC
                   c      GCCA gtctccaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      A G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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