The detailed information of tRNA gene sequence


Sequence ID>WENV170651365
Genome IDJRYF01009171
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4226
End posion on genome 4302
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccgctgc
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
aacaccggaa
Secondary structure (Cloverleaf model)
>WENV170651365	Asp	GTC
                   c      GCCA aacaccggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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