The detailed information of tRNA gene sequence


Sequence ID>WENV170651366
Genome IDJRYF01009312
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1539
End posion on genome 1629
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgaaggcca
tRNA gene sequence 
GGAGTCGTGACCGAGAGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGCCAAAAGCGC
ATCGAGGGTTCGAATCCCTCCGACTCCGCCA
Downstream region at tRNA end position 
ggacgtcgtc
Secondary structure (Cloverleaf model)
>WENV170651366	Ser	GCT
                   a      GCCA ggacgtcgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGCCAAAAGCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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