The detailed information of tRNA gene sequence


Sequence ID>WENV170651369
Genome IDJRYF01009379
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 775
End posion on genome 686
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaccttttt
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTCGAAGGCGCAGCACTGGAAATGCTGTTTAGGGGTGACTCTA
ACGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cattcccttc
Secondary structure (Cloverleaf model)
>WENV170651369	Ser	GGA
                   t      GCCA cattcccttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTTAGGGGTGACTCTAAC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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