The detailed information of tRNA gene sequence


Sequence ID>WENV170651370
Genome IDJRYF01009577
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1438
End posion on genome 1346
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaatcctccc
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGCGCCGACTCGAAATCGGATGGGGGCCTAACCGC
CCCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatcaatcat
Secondary structure (Cloverleaf model)
>WENV170651370	Ser	CGA
                   c      GCCA aatcaatcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGGGGCCTAACCGCCCCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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