The detailed information of tRNA gene sequence


Sequence ID>WENV170651371
Genome IDJRYF01009590
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2122
End posion on genome 2035
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccgaattt
tRNA gene sequence 
GGGAAGGTGCCAGAGTGGTTGAATGGGACGGTCTCGAAAACCGTTGTGGGCTTCGGTCCA
CCGAGGGTTCGAATCCCTCCCTTCCCGCag
Downstream region at tRNA end position 
gtatagactt
Secondary structure (Cloverleaf model)
>WENV170651371	Ser	CGA
                   t      GCag gtatagactt
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGGGCTTCGGTCCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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