The detailed information of tRNA gene sequence


Sequence ID>WENV170651376
Genome IDJRYF01010085
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2261
End posion on genome 2337
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggcaaaaat
tRNA gene sequence 
GTCGGCGTAGCTCAGTTGGTTAGAGCGTAGCACTCATAAAGCTAAGGTCGGAGGATCGTT
CCCTCCCGCCGACACAA
Downstream region at tRNA end position 
aaaatcgccc
Secondary structure (Cloverleaf model)
>WENV170651376	Met	CAT
                   t      ACAA aaaatcgccc
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     C C T C C     T
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    G - C
                    C - G
                    A   A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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