The detailed information of tRNA gene sequence


Sequence ID>WENV170651384
Genome IDJRYF01010263
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2686
End posion on genome 2773
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
GGAGGGATGGCTGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGTTAGAGGTGAAAGCTTC
TCGAGGGTTCGAATCCCTCTCCCTCCGCat
Downstream region at tRNA end position 
tgacaacctg
Secondary structure (Cloverleaf model)
>WENV170651384	Ser	TGA
                   t      GCat tgacaacctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TAGAGGTGAAAGCTTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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