The detailed information of tRNA gene sequence


Sequence ID>WENV170651388
Genome IDJRYF01010356
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 106
End posion on genome 16
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taccgcactt
tRNA gene sequence 
GGAGACGTCGCATAGTTGGTCTAGTGCGCCTCACTGCTAACGAGGTAGGGTCTAAAAGCC
CTCGGAGGTTCGAATCCTCTCGTCTCCGCCA
Downstream region at tRNA end position 
aaattgaaaa
Secondary structure (Cloverleaf model)
>WENV170651388	Ser	GCT
                   t      GCCA aaattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        C      + | | | |     G
  G         T A C G       G G A G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGGGTCTAAAAGCCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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