The detailed information of tRNA gene sequence


Sequence ID>WENV170651390
Genome IDJRYF01010542
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 404
End posion on genome 313
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
taccagatat
tRNA gene sequence 
TCCTCGGTACTCTAATGGTAAGAGGACGCACTGTTAATGCGTTGTAGCCCACCTTGAGTG
GTATGGAGGTTCGAGTCCTCCCTGGGGAGCCA
Downstream region at tRNA end position 
agttcatcct
Secondary structure (Cloverleaf model)
>WENV170651390	Asn	GTT
                   t      GCCA agttcatcct
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G + T
                     G - C          T G
                    T     C C T C C     A
        A A        A      | | | | |     G
      T     T C T C       G G A G G     C
      G     | | | |                 T T
      G     A G A G
        T A        G     TGTAGCCCACCTTGAGTGGTAT
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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