The detailed information of tRNA gene sequence


Sequence ID>WENV170651396
Genome IDJRYF01010917
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1418
End posion on genome 1507
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acttggaggc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTTTATTGCGGCGGTCTTGAAAACCGTTGTGGGCTTCGGTTCA
CCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gcaggtacga
Secondary structure (Cloverleaf model)
>WENV170651396	Ser	TGA
                   c      GCCA gcaggtacga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      T T A        G     TGTGGGCTTCGGTTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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