The detailed information of tRNA gene sequence


Sequence ID>WENV170651398
Genome IDJRYF01010947
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3509
End posion on genome 3434
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgataaacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAGT
CCTGCCTCCGCCACAA
Downstream region at tRNA end position 
agaaaaagcc
Secondary structure (Cloverleaf model)
>WENV170651398	Met	CAT
                   t      ACAA agaaaaagcc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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