The detailed information of tRNA gene sequence


Sequence ID>WENV170651402
Genome IDJRYF01011777
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1513
End posion on genome 1603
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accgtcccgc
tRNA gene sequence 
GGAGGGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGTTAACAGCCC
ACCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
tcgtcaccta
Secondary structure (Cloverleaf model)
>WENV170651402	Ser	GGA
                   c      GCCA tcgtcaccta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGTTAACAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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