The detailed information of tRNA gene sequence


Sequence ID>WENV170651415
Genome IDJRYF01012893
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3526
End posion on genome 3600
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cagacaattt
tRNA gene sequence 
GGGCTTCTAGTATAGGGGGAATTATACTGCGCTTGCACCGCGGAGATCAGGGTTCGAGTC
CCTGGAGGTCCACCA
Downstream region at tRNA end position 
aaaacacgtc
Secondary structure (Cloverleaf model)
>WENV170651415	Ala	TGC
                   t      ACCA aaaacacgtc
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     T - A
                     C - G          T G
                    T     G T C C C     A
      G G A        A      | | | | |     G
    G       T A T G       C A G G G     C
    G         | | +                 T T
    G       T T A T
      A A          A     AGAT
                    C - G
                    T + G
                    G - C
                    C - G
                    G - C
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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