The detailed information of tRNA gene sequence


Sequence ID>WENV170651422
Genome IDJRYF01013992
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 299
End posion on genome 222
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caactcaaaT
tRNA gene sequence 
GGGCCCGTAGCTCAGACTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGCCCCGGGTTCAAA
TCCCGGTGGGTCCATCC
Downstream region at tRNA end position 
ttattttttc
Secondary structure (Cloverleaf model)
>WENV170651422	Ala	TGC
                   T      ATCC ttattttttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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