The detailed information of tRNA gene sequence


Sequence ID>WENV170651423
Genome IDJRYF01014055
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1261
End posion on genome 1336
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tggataaaat
tRNA gene sequence 
GCCCCCGTAGCTCAACGGAGAGAGCGACAGCCTTCTAAGCTGCAGGTTGTGGGTTCGAAT
CCCGCCGGGGGCGCCT
Downstream region at tRNA end position 
ggcgctcttt
Secondary structure (Cloverleaf model)
>WENV170651423	Arg	TCT
                   t      GCCT ggcgctcttt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C A A        A      | + | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      G A          G     AGGTT
                    A   C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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