The detailed information of tRNA gene sequence


Sequence ID>WENV170651427
Genome IDJRYF01014851
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 786
End posion on genome 710
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgacgtga
tRNA gene sequence 
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAA
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
tgcatgaggg
Secondary structure (Cloverleaf model)
>WENV170651427	Ile	GAT
                   a      ACCA tgcatgaggg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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