The detailed information of tRNA gene sequence


Sequence ID>WENV170651432
Genome IDJRYF01015977
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 714
End posion on genome 639
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gtcgcctgtc
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCGGGAGTTCGATC
CTCCTCGTCTCCACCA
Downstream region at tRNA end position 
ccgtcttgga
Secondary structure (Cloverleaf model)
>WENV170651432	Ala	CGC
                   c      ACCA ccgtcttgga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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