The detailed information of tRNA gene sequence


Sequence ID>WENV170651437
Genome IDJRYF01016278
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 391
End posion on genome 317
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgctgtcaa
tRNA gene sequence 
GCCAATGTAGCTCAGGGGTAGAGCACTTCCATGGTAAGGAAGGGGTCGGGGGTTCAATTC
CCTTCATTGGCTCAA
Downstream region at tRNA end position 
gttttgaatc
Secondary structure (Cloverleaf model)
>WENV170651437	Thr	GGT
                   a      TCAA gttttgaatc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + + | | |     A
      G     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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