The detailed information of tRNA gene sequence


Sequence ID>WENV170651438
Genome IDJRYF01016401
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 818
End posion on genome 742
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggctcagt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
aaattcctca
Secondary structure (Cloverleaf model)
>WENV170651438	Met	CAT
                   t      ACCA aaattcctca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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