The detailed information of tRNA gene sequence


Sequence ID>WENV170651441
Genome IDJRYF01017228
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4114
End posion on genome 4201
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcttgattt
tRNA gene sequence 
GGAGAGGTCGCGTAGTCTGGCTTAGCGCGCACGCTTGGAAAGCGTGTAACCCACAAAGGT
TCGCGGGTTCGAATCCCGCCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170651441	Ser	GGA
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  T         T G C G       G C G G G     C
  G         + | | |                 T T
  G         G C G C
    C T T A        G     TAACCCACAAAGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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