The detailed information of tRNA gene sequence


Sequence ID>WENV170651449
Genome IDJRYF01018261
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2322
End posion on genome 2417
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccttgcgctt
tRNA gene sequence 
GGGAGTGGTTAGGTCCCGGTGGGTCTCCTGGTCTTCAAAACCTGTGGCGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
attccgcgct
Secondary structure (Cloverleaf model)
>WENV170651449	SeC(p)	TCA
                   t      GCCt attccgcgct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G A       G T G G G     C
    G       + + | |                 T T
    T       G T C T
      G G          C     TGGCGGGTCGCGTTGCGGGCCGCG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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