The detailed information of tRNA gene sequence


Sequence ID>WENV170651455
Genome IDJRYF01020231
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 225
End posion on genome 133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccttcgcc
tRNA gene sequence 
GGAGACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGGGCAAAACCT
GCATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gatgaacagc
Secondary structure (Cloverleaf model)
>WENV170651455	Ser	GCT
                   c      GCCA gatgaacagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGGGCAAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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