The detailed information of tRNA gene sequence


Sequence ID>WENV170651465
Genome IDJRYF01021270
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1684
End posion on genome 1607
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tccgatgctT
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCAGGGGTTCAAG
TCCCTTCGCGCCCATCA
Downstream region at tRNA end position 
cacacgcttc
Secondary structure (Cloverleaf model)
>WENV170651465	Val	CAC
                   T      ATCA cacacgcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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