The detailed information of tRNA gene sequence


Sequence ID>WENV170651466
Genome IDJRYF01021346
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 240
End posion on genome 154
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatctttaT
tRNA gene sequence 
GCCGGGATAGTCTAGCCAGGTAAGGCGCAAGACTGGAAATCTTGTGGAGCTTTGCTCCGC
CTGGGTTCAAATCCCAGTCCCGGCGTtt
Downstream region at tRNA end position 
aaaaacaaac
Secondary structure (Cloverleaf model)
>WENV170651466	Ser	GGA
                   T      GTtt aaaaacaaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    A       | | + |                 T T
    G       A G G C
      G T A        G     TGGAGCTTTGCTCCGC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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