The detailed information of tRNA gene sequence


Sequence ID>WENV170651468
Genome IDJRYF01023120
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 423
End posion on genome 496
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacttaaacg
tRNA gene sequence 
GGGCCCGTAGCGCAGCGGTTAGCGCAGGAGACTCATAATCCCTTGGTCGCTGGTTCGAAT
CCAGCCGGGCCCACtc
Downstream region at tRNA end position 
aaaatgacct
Secondary structure (Cloverleaf model)
>WENV170651468	Met	CAT
                   g      ACtc aaaatgacct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      C G A        A      | | | | |     G
    G       C G C G       G C T G G     C
    G       | | | |                 T T
    T       G C G C
      T A          A     TGGTC
                    G + T
                    G - C
                    A   C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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