The detailed information of tRNA gene sequence


Sequence ID>WENV170651469
Genome IDJRYF01023499
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3022
End posion on genome 3097
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taacaaaaaa
tRNA gene sequence 
GGTCCCGTGGTGTAGTGGCTAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCGATA
CCCGTCGGGACCGCCA
Downstream region at tRNA end position 
tcctgtagat
Secondary structure (Cloverleaf model)
>WENV170651469	Asp	GTC
                   a      GCCA tcctgtagat
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          A T
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      T A          G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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