The detailed information of tRNA gene sequence


Sequence ID>WENV170651472
Genome IDJRYF01024615
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1118
End posion on genome 1205
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgaagtaat
tRNA gene sequence 
GGAGGTGTGGCAGAGTGGTCTATCGCGACGCGCTTGAAACGCGTAGGCTCGAAAGGGTCC
GTGGGTTCGAATCCTACCGCCTCCGCCA
Downstream region at tRNA end position 
gaacattgtc
Secondary structure (Cloverleaf model)
>WENV170651472	Ser	TGA
                   t      GCCA gaacattgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G A C G       G T G G G     C
    G       +   | |                 T T
    T       T C G C
      C T A        G     AGGCTCGAAAGGGTCC
                    A - T
                    C - G
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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