The detailed information of tRNA gene sequence


Sequence ID>WENV170651474
Genome IDJRYF01024615
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1833
End posion on genome 1908
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaataaaaat
tRNA gene sequence 
GGGGGCTTAGCTCAGCTGGGAGAGCGTCGCAATGGCATTGCGAAGGTCAGGGGTTCGATC
CCCCTAGCTTCCACCA
Downstream region at tRNA end position 
gttctcactg
Secondary structure (Cloverleaf model)
>WENV170651474	Ala	GGC
                   t      ACCA gttctcactg
                     G - C
                     G - C
                     G + T
                     G + T
                     G - C
                     C - G
                     T - A          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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