The detailed information of tRNA gene sequence


Sequence ID>WENV170651477
Genome IDJRYF01024615
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2920
End posion on genome 2993
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacgaatgc
tRNA gene sequence 
AGCGGGATAGAGAAGTTGGTCATCTCACCGGCCTCATAAGCCGGAGATCGGTGGTTCGAG
TCCACCTCCCGCAAatc
Downstream region at tRNA end position 
tggcattctt
Secondary structure (Cloverleaf model)
>WENV170651477	Met	CAT
                   c      Aatc tggcattctt
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       A G A G       G G T G G     C
    G       | | | |                 T T
    G       T C T C
      T C A        A     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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