The detailed information of tRNA gene sequence


Sequence ID>WENV170651484
Genome IDJRYF01026781
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 344
End posion on genome 435
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
accatgatct
tRNA gene sequence 
GGAAGGGCAACGTCCCCGGTGGGGCGCCCGGTCTTCAAAACCGGTGAGGGGCGTTAGACG
TCTCTGGTGGGTTCGACTCCCATGCCCTTCCCnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170651484	SeC(p)	TCA
                   t      Cnnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T C
                    A     T A C C C     A
      C C C        A      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          C     TGAGGGGCGTTAGACGTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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