The detailed information of tRNA gene sequence


Sequence ID>WENV170651486
Genome IDJRYF01027207
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2725
End posion on genome 2801
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggattagcg
tRNA gene sequence 
CGCAGGGTGGCGTAGTCTGGTAGCGCGCTGGGTTCATACCCCGGAGGTCGCCGGTTCAAA
TCCGGCCTCTGCAACCA
Downstream region at tRNA end position 
agccctagta
Secondary structure (Cloverleaf model)
>WENV170651486	Met	CAT
                   g      ACCA agccctagta
                     C   A
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | | | | |     A
    C       T G C G       G C C G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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