The detailed information of tRNA gene sequence


Sequence ID>WENV170651490
Genome IDJRYF01029639
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 982
End posion on genome 1058
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agactggtcg
tRNA gene sequence 
CGCAGGGTGGCGTAGTCTGGTAGCGCGCTGGGTTCATACCCCGGAGGTCGCCGGTTCAAA
TCCGGCCTCTGCAACCA
Downstream region at tRNA end position 
agccctagta
Secondary structure (Cloverleaf model)
>WENV170651490	Met	CAT
                   g      ACCA agccctagta
                     C   A
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | | | | |     A
    C       T G C G       G C C G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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