The detailed information of tRNA gene sequence


Sequence ID>WENV170651491
Genome IDJRYF01029898
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 795
End posion on genome 706
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggttgattgc
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCTAGTGCGCACGATTGGAAATCGTGTATCTCGCAAGGGA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
nnataaggtg
Secondary structure (Cloverleaf model)
>WENV170651491	Ser	GGA
                   c      GCCA nnataaggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TATCTCGCAAGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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