The detailed information of tRNA gene sequence


Sequence ID>WENV170651504
Genome IDJRYF01036337
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1137
End posion on genome 1212
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taattttcaa
tRNA gene sequence 
GGGCCCATAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGTCGAGGGTTCGAAT
CCCTCTGGGTCCACTA
Downstream region at tRNA end position 
aatttcataa
Secondary structure (Cloverleaf model)
>WENV170651504	Ala	GGC
                   a      ACTA aatttcataa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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