The detailed information of tRNA gene sequence


Sequence ID>WENV170651508
Genome IDJRYF01038357
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2399
End posion on genome 2473
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agtgtactct
tRNA gene sequence 
GGGCGAGTAGCTCAGTTGGTTAGAGCGCTTCTCTTACAAAGAAGAGGTCATGGGTTCGAG
TCCCTTCTCGCCCACtt
Downstream region at tRNA end position 
atgatttatc
Secondary structure (Cloverleaf model)
>WENV170651508	Val	TAC
                   t      ACtt atgatttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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