The detailed information of tRNA gene sequence


Sequence ID>WENV170651511
Genome IDJRYF01041825
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 273
End posion on genome 203
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actattttgt
tRNA gene sequence 
GGTTAGATAACATAATGGTAATGTGTGGATCTGCAAAATCCGAAATGATGGTTCAACTCC
ATCTCTAAACTata
Downstream region at tRNA end position 
attaaataaa
Secondary structure (Cloverleaf model)
>WENV170651511	Cys	GCA
                   t      Tata attaaataaa
                     G - C
                     G   A
                     T - A
                     T - A
                     A - T
                     G - C
                     A - T          T C
                    T     C T A C C     A
        A A        A      | | | | |     A
      T     T A C A       G A T G G     C
      G     | | | |                 T T
      G     A T G T
        T A        G     AAAT
                    T + G
                    G - C
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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