The detailed information of tRNA gene sequence


Sequence ID>WENV170651515
Genome IDJRYF01043261
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 58
End posion on genome 144
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctaattaggT
tRNA gene sequence 
GCCGGGATAGTCTAGTCCGGTAAGGCGCAGGAGTCGAAATCCTGTTGAGCGATGCTCGTC
CTGGGTTCAAATCCCAGTCCCGGCGTtt
Downstream region at tRNA end position 
tataaatttc
Secondary structure (Cloverleaf model)
>WENV170651515	Ser	CGA
                   T      GTtt tataaatttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TTGAGCGATGCTCGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  G       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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