The detailed information of tRNA gene sequence


Sequence ID>WENV170651536
Genome IDJRYF01057359
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2212
End posion on genome 2141
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgacgagtga
tRNA gene sequence 
GGCCGCATAGCTCGAAGGTCGAGCGCCTGCCTTGTAAGCAGGTGGCGAGGGTTCGATTCC
CTCTGTGGCCTCtc
Downstream region at tRNA end position 
ctcttacgag
Secondary structure (Cloverleaf model)
>WENV170651536	Thr	TGT
                   a      TCtc ctcttacgag
                     G - C
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     A - T          T T
                    T     C T C C C     A
        A G        A      | | | | |     G
      A     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T C        G     TGGC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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