The detailed information of tRNA gene sequence


Sequence ID>WENV170651555
Genome IDJRYF01071112
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 599
End posion on genome 674
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcccggtctc
tRNA gene sequence 
GGCTCCATCGTCTAGAGGCCCAGGACGTGGCCCTTTCAAGGCCAAAACACGGGTTCGAAT
CCCGTTGGAGCTAACA
Downstream region at tRNA end position 
atcgcttcat
Secondary structure (Cloverleaf model)
>WENV170651555	Glu	TTC
                   c      AACA atcgcttcat
                     G + T
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    T - A
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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