The detailed information of tRNA gene sequence


Sequence ID>WENV170651563
Genome IDJRYF01078949
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 361
End posion on genome 437
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacgcttctT
tRNA gene sequence 
GGGCCTGTAGCTTAGTCCGGTTAGAGCGCTCGGCTCATAACCGAGTGGCCGCCGGTTCAA
ATCCGGCCAGGCCCATgc
Downstream region at tRNA end position 
tggcaactat
Secondary structure (Cloverleaf model)
>WENV170651563	Met	CAT
                   T      ATgc tggcaactat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       G C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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