The detailed information of tRNA gene sequence


Sequence ID>WENV170651564
Genome IDJRYF01084286
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 474
End posion on genome 403
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccttcctaat
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAAATGCCTGCAGAGCATTTCTACTCCGGTTCGATTC
CGGATCTTGGCTtcg
Downstream region at tRNA end position 
agtatggcgg
Secondary structure (Cloverleaf model)
>WENV170651564	Cys	GCA
                   t      Ttcg agtatggcgg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G + T          T T
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     TCTAC
                    A - T
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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