The detailed information of tRNA gene sequence


Sequence ID>WENV170651567
Genome IDJRYF01087087
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 172
End posion on genome 258
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagcgctgc
tRNA gene sequence 
GGAGAGCATGGGCAATTGGTAGCCCAGAATCCTGCTAAGATTCCGTCGCTTCGGCACATC
GGGGTTCGAGTCCCCGGCTCTCCGCCA
Downstream region at tRNA end position 
tgttctttga
Secondary structure (Cloverleaf model)
>WENV170651567	Ser	GCT
                   c      GCCA tgttctttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T G
                    A     G C C C C     A
      T A A        T      | | | | |     G
    T       C G G G       C G G G G     C
    G       | | | |                 T T
    G       G C C C
      T A          A     CGTCGCTTCGGCACAT
                    G - C
                    A - T
                    A - T
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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