The detailed information of tRNA gene sequence


Sequence ID>WENV170651597
Genome IDJRYF01114643
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 59
End posion on genome 147
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtttgtgagc
tRNA gene sequence 
GGAGGAATGGCCGGGCGGTTTAAGGCGGCGGTCTTGAAGACCGCTGTAGGGGAACTCTAT
TGAGGGTTCGAAGCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttatttttcg
Secondary structure (Cloverleaf model)
>WENV170651597	Ser	TGA
                   c      GCCA ttatttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          G A
                    T     C T C C C     A
      C G G        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGGGAACTCTATT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       G
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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