The detailed information of tRNA gene sequence


Sequence ID>WENV170651606
Genome IDJRYF01123483
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 106
End posion on genome 12
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aggacagcac
tRNA gene sequence 
GGAAGAGTGACGTGACCCGGTGGTCCGACTGGACTTCAAATCCAGGTGGGGTTGCCAGCA
ATCCCGGGTGGGTTCGACTCCCATACTCTTCCGCCt
Downstream region at tRNA end position 
ggtacatcgc
Secondary structure (Cloverleaf model)
>WENV170651606	SeC(p)	TCA
                   c      GCCt ggtacatcgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T C
                    G     T A C C C     A
      C C A        A      + | | | |     G
    C       G T G C       G T G G G     C
    G       +   | |                 T T
    G       T C C G
      T G G        A     GTGGGGTTGCCAGCAATCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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