The detailed information of tRNA gene sequence


Sequence ID>WENV170651618
Genome IDJRYF01140746
Search identical group
Phylum/Class[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 149
End posion on genome 60
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtttatttaA
tRNA gene sequence 
GAAGAAATGGCTGAGTGGTTGAAAGCAGCTGTCTTGAAAACAGTTATATGATTATATCAT
ATCGAGAGTTCGAATCTCTCTTTCGCCTTag
Downstream region at tRNA end position 
aaaatttttc
Secondary structure (Cloverleaf model)
>WENV170651618	Ser	TGA
                   A      TTag aaaatttttc
                     G - C
                     A   C
                     A   G
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     TATATGATTATATCATATC
                    G + T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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