The detailed information of tRNA gene sequence


Sequence ID>WENV170651634
Genome IDJRYG01000043
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 17303
End posion on genome 17379
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agagaaagca
tRNA gene sequence 
GGAGTGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
accaatcctc
Secondary structure (Cloverleaf model)
>WENV170651634	Asp	GTC
                   a      GCCA accaatcctc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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