The detailed information of tRNA gene sequence


Sequence ID>WENV170651635
Genome IDJRYG01000043
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 53539
End posion on genome 53465
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgcgccctac
tRNA gene sequence 
GGGCGGTTAACTCAGCGGTAGAGTGCTATCCTCACACGGTAGAAGTCACTGGTTCGATCC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
attcacatcg
Secondary structure (Cloverleaf model)
>WENV170651635	Val	CAC
                   c      ACCA attcacatcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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