The detailed information of tRNA gene sequence


Sequence ID>WENV170651636
Genome IDJRYG01000060
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 10225
End posion on genome 10301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccccccgc
tRNA gene sequence 
GGGCCGTTAGCTCAGTCGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTTGGTTCGAG
TCCAACACGGCCCACCA
Downstream region at tRNA end position 
acccgcatgc
Secondary structure (Cloverleaf model)
>WENV170651636	Met	CAT
                   c      ACCA acccgcatgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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